Phylogenetic consensus tree constructed from ClustalX in-frame aligned full-length UreC protein sequences following a Bayesian analysis. Posterior probability values of the observed clades are given at the branch points. GenBank accessions used are as follows - were: Deinococcus radiodurans strain R1 [AE001863.1]; the cyanobacteria: Nostoc sp. PCC 7120 [NPCC7120; AP003593.1], Prochlorococcus marinus strain PCC 9511 [Pmar; AF242489.1], Synechocystis sp. PCC 6803 [PCC6803; NC_000911.1], Synechococcus sp. WH 7805 [WH7805; AF056189.1], Thermosynechococcus elongatus BP-1 [Telo; AP005369.1]; the alpha-proteobacteria: Agrobacterium tumefaciens str. C58 [Atum; AE009188.1], Brucella melitensis strain 16M [Bmel; AE009506.1], Brucella melitensis biovar Abortus strain 2308 [Babo; AF361941.1], Mesorhizobium loti strain MAFF303099 [Mlot; AP003005.2], Rhodobacter capsulatus strain B100 [Rcap; AB006984.1], Sinorhizobium melilot [Smel; S69145.1], Sinorhizobium leguminosarum biovar Viciae strain UPM791 [Sleg; AF347070.1]; the beta-proteobacteria: Bordetella bronchiseptica strain BB7866 [Bbro; AF000579.1], Burkholderia fungorum [Bfung; ZP_00033670.1], Ralstonia solanacearum strain GMI1000 [Rsol; AL646067.1], Ralstonia metallidurans (R. eutropha) strain H16 [Rmet; Y13732.1]; and the gamma-proteobacteria: Actinobacillus pleuropneumoniae ="CM5" [Aple; U89957.1], Azotobacter vinelandi [Avin; ZP_00088492.1], Escherichia coli O157:H7 EDL933, O-island #43 [Ecol933_43; AE005272.1], Escherichia coli O157:H7 EDL933, O-island #48 [Ecol933_48; AE005308.1], Klebsiella aerogenes strain CG253 [Kaer; M36068.1 (16)], Microbulbifer degradans 2-40 [Mdeg; ZP_00066423.1], Proteus mirabilis [Pmir; M31834.1], Proteus vulgaris strain DSM 30118 [Pvul; X51816.1], Pseudomonas aeruginosa PA01 [Paer; AE004091], Pseudomonas fluorescens PfO-1 [Pfluo; ZP_00083320.1], Pseudomonas putida KT2440 [Pputi; AE016784.1], Pseudomonas syringae pv. tomato str. DC3000 [Psyr; AE016873], Vibrio parahaemolyticus strain TH3996 [Vpar; AB038238.1], Yersinia enterocolitica strain 6471/76 (serotype O:3) [Yent; Z18865.1]; the epsilon-proteobacteria: Helicobacter heilmannii isolate="2Ó [L25079.1], Helicobacter felis ATCC 49179 [Hfe; X69080.1], Helicobacter pylori J99 [HpylJ99; NC_000921.1], Helicobacter hepaticu [Hhep; AF332656.1]; the actinobacteria: Actinomyces naeslundii WVU45 [Anae; AF056321.1], Corynebacterium glutamicum ATCC13032 [Cglu; AJ251883.1], Mycobacterium tuberculosis CDC1551 [Mtub; AE007047.1], Streptomyces coelicolor A3(2) [Scoe; AL391014.1]; the low G+C Gram-positive bacteria: Bacillus sp. "TB-90" [Btb90; AF056321.1], Bacillus halodurans [Bhal; AP001507.1], Clostridium perfringens CP76 [Cper; Y10356.1], Lactobacillus fermentum JCM5869 [Lfer; D10605.1], Sporosarcina (Bacillus) pasteurii DSM 33 =ATCC 11859 [Bpas; X78411.1], Staphylococcus xylosu [Sxyl; X74600.1], Streptococcus salivarius 57.I [Ssal; U35248.1], and Ureaplasma urealyticum [Uure; NC_002162.1]; the crenarchaeon Sulfolobus tokodaii [Stok; AP000984.1]; and the plant: Oryza sativa (indica cultivar-group) cultivar="IR36 [AB075476.2].
Teresa E. Koper, Amal F. El-Sheikh, Jeanette M. Norton , and Martin G. Klotz . 2004. Urease-Encoding Genes in Ammonia-Oxidizing Bacteria. Applied and Environmental Microbiology 70:2342-2348.
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